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genome polishing — RMBL Knowledge Commons

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genome polishing

Scope: methodological

Papers: 2 | Mentions: 2

Local Knowledge Graph (Top 39 entities)

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Knowledge graph centered on genome polishing with 39 nodes and 125 connections. Top connected: Ligusticum porteri, Lepidoptera, Bacteria, Cardamine cordifolia, plant-microbial coupling.

Definition

Computational method to improve genome assembly accuracy by using short reads to correct errors in long-read assemblies

Publications (2)

The genome of the Margined White butterfly (Pieris macdunnoughii): sex chromosome insights and the power of polishing with PoolSeq data

2021Genome Biology and Evolutiontested

Complete Genome Sequences for <i>Pseudomonas sp.</i> Strains 29A and 43A

2020Microbiology Resource Announcements DOI: 10.1128/MRA.00845-20methodological

Related Concepts (9)

PoolSeq

measurement2 shared papers

plant-microbial coupling

process1 shared paper

comparative genomics

framework1 shared paper

chromosomal inversion

phenomenon1 shared paper

sex chromosome evolution

process1 shared paper

ortholog hit ratio

metric1 shared paper

antimicrobial resistance

phenomenon1 shared paper

evolutionary trap

phenomenon1 shared paper

genome annotation

methodology1 shared paper

Frequently Associated Species

Cardamine cordifolia

Brassicaceae1 paper

Bacteria

Lepidoptera

native fish

non-native plants

Arthropoda

native fish species

Ligusticum porteri

Apiaceae1 paper

native fishes

Pieris napi

Pieridae1 paper