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Rocky Mountain Biological Laboratory · Gothic, Colorado · founded 1928. A non-profit field station for long-term ecological research.

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P.O. Box 519 Crested Butte, CO 81224 · (970) 349-7231 · RMBL is a Colorado non-profit organization with IRS 501(c)(3) status. RMBL is an equal opportunity service provider and employer and operates under permit from the USDA Forest Service, Gunnison National Forest. Support for the Knowledge Commons provided by the Clark Family Foundation.

TIGRFAM database search — RMBL Knowledge Commons

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TIGRFAM database search

Papers: 1 | Mentions: 1

Local Knowledge Graph (Top 67 entities)

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Knowledge graph centered on TIGRFAM database search with 67 nodes and 131 connections. Top connected: Rocky Mountain Biological Laboratory, Crested Butte, East River, Organic matter decomposition, Soil characteristics.

Method synopsis

Database search using TIGRFAM protein families for gene identification

Synthesized from method descriptions across 1 paper using this protocol.

Papers Using This Protocol (1)

article

Microbial communities across a hillslope-riparian transect shaped by proximity to the stream, groundwater table, and weathered bedrock

2019Ecology and Evolution

TIGRFAM database search

Local Knowledge Graph (Top 67 entities)

Method synopsis

Papers Using This Protocol (1)

Microbial communities across a hillslope-riparian transect shaped by proximity to the stream, groundwater table, and weathered bedrock

Species Studied With This Protocol

Betaproteobacteria

Gammaproteobacteria

Deltaproteobacteria

Nitrospirae

Rokubacteria

Bromus inermis

Anaeromyxobacter dehalogenans

Salix lucida subsp. lasiandra

Geobacter

Archaea

Places Where Used

Crested Butte

Upper Colorado River Basin

Colorado

Rocky Mountain Biological Laboratory

East River Watershed

East River

PLM0

PLM1

PLM2

PLM3