Knowledge graph centered on mitochondrial DNA barcoding (Drosophilidae) with 70 nodes and 164 connections. Top connected: Ligusticum porteri, Lepidoptera, Arabidopsis, Boechera stricta, Boechera.
Time-calibrated phylogenetic analysis using multiple genes and both maximum likelihood and Bayesian approaches to estimate evolutionary relationships and timing of trait evolution.
Synthesized from method descriptions across 4 papers using this protocol.
Steps below were extracted from the most recent peer-reviewed implementation of this protocol in the corpus — Evolution and genomic basis of the plant penetrating ovipositor: a key morphological trait in herbivorous Drosophilidae (2022), Proceedings of the Royal Society B. The protocol was originally introduced by Mining the plant-insect interface with a leafmining <i>Drosophila</i> of <i>Arabidopsis</i> (2011), Molecular Ecology. Implementations in other papers (listed below) may differ.