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Phylomatic phylogenetic analysis — RMBL Knowledge Commons

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Phylomatic phylogenetic analysis

Subcategory: phylogenetic analysis

Papers: 1 | Mentions: 1

Local Knowledge Graph (Top 32 entities)

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Knowledge graph centered on Phylomatic phylogenetic analysis with 32 nodes and 111 connections. Top connected: Rocky Mountain Biological Laboratory, Gothic, Barbey's Larkspur, Nuttall's Larkspur, Larkspurs.

Method synopsis

Computational approach to estimate phylogenetic relationships and distances using the Phylomatic web service with standardized angiosperm phylogenies and fossil-calibrated branch lengths.

Synthesized from method descriptions across 1 paper using this protocol.

Typical Equipment

Phylomatic web service
Mesquite software ver. 2.75
Phylocom software

Output Measurements

mean phylogenetic distance
nearest neighbor distance
phylogenetic distance matrix

Papers Using This Protocol (1)

Floral visitation determined by phylogenetic distance in the plant communities of Gothic, CO.

Species Studied With This Protocol

Populus tremuloides

Salicaceae1 paper

Engelmann Spruce

Pinaceae1 paper

Nuttall's Larkspur

Ranunculaceae1 paper

Barbey's Larkspur

Ranunculaceae1 paper

Populus

Salicaceae1 paper

Aconitum columbianum

Ranunculaceae1 paper

Populus angustifolia

Salicaceae1 paper

Abies lasiocarpa var. lasiocarpa

Pinaceae1 paper

Aconitum

Ranunculaceae1 paper

Bombyliidae

Bombyliidae1 paper

Places Where Used

Colorado East River Valley

Gothic

Colorado

Rocky Mountain Biological Laboratory

study site1 paper

Washington Gulch

study site1 paper

Emerald Lake

Gunnison Basin

bioregion1 paper

Virginia Basin

study site1 paper

Maroon Bells Wilderness

study site1 paper