Species &amp; Taxa

Bacteria238 mentionsstudy subject, pest

Bacteria

photosynthetic bacteria —

Bacteria24 mentionsstudy subject

Pseudomonas

Pseudomonadaceae > Pseudomonadales > Gammaproteobacteria

Bacteria15 mentionslaboratory organism, qPCR standard

Escherichia coli

Enterobacteriaceae > Enterobacteriales > Gammaproteobacteria

Bacteria14 mentionsindicator species

Mycobacterium

Mycobacteriaceae > Actinomycetales

Bacteria13 mentionsmanaged species

Rhizobium

Rhizobium bacteria — Rhizobiaceae > Rhizobiales > Alphaproteobacteria

Bacteria11 mentionspathogen, plant pathogen

Pseudomonas syringae

Pseudomonadaceae > Pseudomonadales > Gammaproteobacteria

Gammaproteobacteria

Xanthomonadales > Gammaproteobacteria

Bacteria10 mentions

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core floodplain microbiome member

Bacteria10 mentionsbacterial strain, plant pathogen

Pseudomonas fluorescens

Pseudomonadaceae > Pseudomonadales > Gammaproteobacteria

Bacteria6 mentionsstudy subject

Streptococcus

Streptococcaceae > Lactobacillales > Bacilli

Bacteria5 mentionscore floodplain microbiome member

Betaproteobacteria

Rhodocyclales > Betaproteobacteria

Bacteria5 mentionscore floodplain microbiome member

Deltaproteobacteria

Syntrophobacterales > Deltaproteobacteria

Bacteria5 mentionsmicrobial iron reducer

Geobacter

Geobacteraceae > Desulfuromonadales > Deltaproteobacteria

Bacteria5 mentionsendosymbiont

Hamiltonella defensa

Bacteria4 mentionsgut microbe

Commensalibacter

Gammaproteobacteria

Bacteria4 mentionsendosymbiont

Wolbachia

Anaplasmataceae > Rickettsiales > Alphaproteobacteria

Bacteria4 mentionsmanaged species

aerobic bacteria

aerobic bacteria —

Bacteria3 mentionsendosymbiont

Buchnera aphidicola

Enterobacteriaceae > Enterobacteriales > Gammaproteobacteria

Bacteria3 mentionsnectar inhabitant, nectar-inhabiting bacterium

Pantoea

Enterobacteriaceae > Enterobacteriales > Gammaproteobacteria

Bacteria3 mentionsplant pathogen, pathogen

Pseudomonas viridiflava

Pseudomonadaceae > Pseudomonadales > Gammaproteobacteria

Bacteria3 mentionsgut microbe

Rhodococcus

Nocardiaceae > Actinomycetales > Actinobacteria

Bacteria3 mentionscore floodplain microbiome member

Rokubacteria

Bacteria2 mentionsmentioned

Anaeromyxobacter dehalogenans

Cystobacteraceae > Myxococcales > Deltaproteobacteria

B. pertussis

Bacteria2 mentionscore floodplain microbiome member

Candidatus Latescibacteria

Chamaesiphon

blue green alga — Chamaesiphonaceae > Gomontiellales > Cyanophyceae

Bacteria2 mentionsindicator species

Chitinophagaceae

Chitinophagaceae > Sphingobacteriales > Sphingobacteriia

Clostridium spp.

botulism — Clostridiaceae

Cyanobacteriota

blue-green algae — Vampirovibrionophyceae

Gilliamella apicola

Orbaceae > Orbales > Gammaproteobacteria

Bacteria2 mentionsindicator species

Isosphaera

Planctomycetaceae > Planctomycetales > Planctomycetacia

Mycobacterium avium

avian tuberculosis — Mycobacteriaceae

Mycoplasma gallisepticum

Mycoplasmataceae > Mycoplasmatales

Bacteria2 mentionsnectar specialist bacterium

Neokomagataea

Acetobacteraceae > Rhodospirillales > Alphaproteobacteria

Bacteria2 mentionsrelated species

Pantoea agglomerans

Enterobacteriaceae > Enterobacteriales > Gammaproteobacteria

Bacteria2 mentionsrelated species

Pantoea brenneri

Enterobacteriaceae > Enterobacteriales > Gammaproteobacteria

Bacteria2 mentionsrelated species

Pantoea eucalypti

Enterobacteriaceae > Enterobacteriales > Gammaproteobacteria

Pasteurella multocida

fowl cholera bacterium — Pasteurellaceae

Bacteria2 mentionsnitrogen-fixing bacteria

Rhizobium leguminosarum

Rhizobiaceae > Rhizobiales > Alphaproteobacteria

Spirochaetes

spirochetes — Spirochaetales > Spirochaetes

Bacteria2 mentionslaboratory organism

Staphylococcus aureus

Staphylococcaceae > Bacillales > Bacilli

Bacteria2 mentionsstudy subject, pest

Yersinia pestis

plague — Enterobacteriaceae > Enterobacteriales > Gammaproteobacteria

Aphanizomenon sp.

Aphanizomenonaceae

Bacteria1 mentionpest

Bacteria1 mentionmicrobial community member

Atribacteria

Bacteria1 mentionmanaged species

Bacillus thuringiensis israelensis

Bti —

Bacteria1 mentionanaerobic methanotroph found in Amazonian floodplains

Candidatus Methylomirabilis

Bacteria

Bacteria1 mentioncomammox reference organism

Candidatus Nitrospira kreftii

Nitrospiraceae > Nitrospirales > Nitrospirae